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Cranberry (Vaccinium macrocarpon) clone CNJ99-125-1 genome, July 2009 extraction
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Cranberry (Vaccinium macrocarpon) clone CNJ99-125-1 genome, July 2009 extraction. Retrieved from https://doi.org/doi:10.7282/T3J38S13

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TitleCranberry (Vaccinium macrocarpon) clone CNJ99-125-1 genome, July 2009 extraction
Research genreResearch data; Color space data; Living specimens
Type of itemDataset
Creator(s)Vorsa, Nicholi; Polashock, James; Georgi, Laura
Extent4 digital file(s)
Abstract or summaryVaccinium macrocarpon clone CNJ99-125-1, a fifth-generation inbred clone derived from self-pollination of the cultivar Ben Lear. Sequencing methodology: Mate-paired library, 1.5-2 kilobase pair (kb) fragments.
Funder or SponsorPhilip E. Marucci Center for Blueberry and Cranberry Research and Extension; United States. Dept. of Agriculture. Specialty Crop Research Initiative; National Institute of Food and Agriculture (U.S.)
Contents noteThe four files represent data from a single sample.
Solid309_2010301_2Cranberry_MP_F3.csfasta (G-ZIP file-1) is the sequence data from the forward read of the sample.
Solid309_2010301_2Cranberry_MP_F3.qual (GZIP file-2) is its associated quality score.
Solid309_2010301_2Cranberry_MP_R3.csfasta (GZIP file-3) is the sequence data from the reverse read of the sample.
Solid309_2010301_2Cranberry_MP_R3.qual (GZIP file-4) is its associated quality score.
Data Life Cycle Event(s)
   Type: Grant award
   Label: Breeding and genetics of fruit-rot resistance and polyphenolics in the American cranberry
   Date: 2008-09-2012-08
   Detail: Funded by the U.S. Department of Agriculture Specialty Crop Research Initiative September 2008-August 2012
   Service provider: Waksman Genomics Core Facility (Waksman Genomics Core Facility, Rutgers University)

   Researcher: Vorsa, Nicholi
   Researcher: Georgi, Laura
   Researcher: Polashock, James (USDA-ARS)

   Researcher: Patten, Kim (Washington State University)

   Funder: USDA Specialty Crop Research Initiative
   Researcher: Singh, Ajay
   Researcher: Tadych, Mariusz
   Reference: http://pemaruccicenter.rutgers.edu/assets/PDF/prog/ACGABreedingAbstract_Summer2009-Breeding-geneticsOfFruit-rotResistance.pdf
Data Life Cycle Event(s)
   Type: Grant award
   Label: Cranberry and blueberry breeding, disease and insect management
   Date: 2008-08-01
   Date: 2009-08
   Detail: Funded by USDA National Institute of Food and Agriculture from August 2008-August 2009
   Service provider: Waksman Genomics Core Facility (Waksman Genomics Core Facility, Rutgers University)

   Researcher: Oudemans, Peter
   Researcher: Polashock, James (USDA Agricultural Research Service)

   Researcher: Howell, Amy
   Researcher: Vorsa, Nicholi
   Researcher: Rodriquez-Saona, Cesar
   Researcher: Michael, T.P.
Data Life Cycle Event(s)
   Type: Gene sequencing
   Label: Vaccinium macrocarpon clone CNJ99-125-1, a fifth-generation inbred clone derived from self-pollination of the cultivar Ben Lear.
   Detail: Sequencing took place at the Waksman Genomics Core Facility (contact David Sidote) using the Applied Biosystems SOLiD 3 Plus. Sequencing methodology was Mate-paired library, 1.5-2 kilobase pair (kb) fragments.
   Service provider: Waksman Genomics Core Facility
   Name: Applied Biosystems SOLiD 3 Plus System
   Reference: http://www3.appliedbiosystems.com/cms/groups/mcb_marketing/documents/generaldocuments/cms_072050.pdf
SubjectsVaccinium macrocarpon
Citation URLhttps://doi.org/doi:10.7282/T3J38S13
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