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RCSB Protein Data Bank: A Resource for Chemical, Biochemical, and Structural Explorations of Large and Small Biomolecules

Descriptive

TypeOfResource
Text
TitleInfo
Title
RCSB Protein Data Bank: A Resource for Chemical, Biochemical, and Structural Explorations of Large and Small Biomolecules
Name (type = personal)
NamePart (type = family)
Zardecki
NamePart (type = given)
Christine
Affiliation
Proteomics, Rutgers University
Role
RoleTerm (authority = marcrt); (type = text)
author
Name (authority = orcid); (authorityURI = http://id.loc.gov/vocabulary/identifiers/orcid.html); (type = personal); (valueURI = http://orcid.org/0000-0002-2109-5411)
NamePart (type = family)
Dutta
NamePart (type = given)
Shuchismita
Affiliation
Proteomics, Rutgers University
Role
RoleTerm (authority = marcrt); (type = text)
author
Name (type = personal)
NamePart (type = family)
Goodsell
NamePart (type = given)
David S.
Affiliation
The Scripps Research Institute
Role
RoleTerm (authority = marcrt); (type = text)
author
Name (type = personal)
NamePart (type = family)
Voigt
NamePart (type = given)
Maria
Affiliation
Proteomics, Rutgers University
Role
RoleTerm (authority = marcrt); (type = text)
author
Name (authority = orcid); (authorityURI = http://id.loc.gov/vocabulary/identifiers/orcid.html); (type = personal); (valueURI = http://orcid.org/0000-0002-2487-9713)
NamePart (type = family)
Burley
NamePart (type = given)
Stephen K.
Affiliation
Proteomics, Rutgers University
Role
RoleTerm (authority = marcrt); (type = text)
author
Name (authority = RutgersOrg-Department); (type = corporate)
NamePart
Proteomics
Genre (authority = RULIB-FS)
Article, Non-refereed
Genre (authority = NISO JAV)
Accepted Manuscript (AM)
OriginInfo
DateIssued (encoding = w3cdtf); (keyDate = yes); (qualifier = exact)
2016
Abstract (type = Abstract)
The Research Collaboratory for Structural Bioinformatics (RCSB) Protein Data Bank (PDB) supports scientific research and education worldwide by providing access to annotated information about three-dimensional (3D) structures of macromolecules (e.g., nucleic acids, proteins), and associated small molecules (e.g., drugs, cofactors, inhibitors) in the PDB archive. Researchers, educators, and students use RCSB PDB resources to study the shape and interactions of biological molecules and their implications in molecular biology, medicine, biotechnology, and beyond. RCSB PDB supports development of standards for data deposition, representation, annotation, and validation of atomic structural data obtained from various experimental methods. Uniform representation of PDB data is essential for providing consistent search and analysis capabilities for all PDB users, from beginning students to domain experts. The RCSB PDB Web site provides tools for searching, visualizing, and analyzing PDB data, including easy exploration of chemical interactions that stabilize macromolecules and play important roles in their interactions and functions. In addition, educational resources are available for free and unrestricted use in the classroom for exploring chemistry and biology at the molecular level.
Language
LanguageTerm (authority = ISO 639-3:2007); (type = text)
English
PhysicalDescription
InternetMediaType
application/pdf
Extent
17 p.
Subject (authority = LCSH)
Topic
Chemistry--Study and teaching (Secondary)
Subject (authority = local)
Topic
First-year college students
Subject (authority = LCSH)
Topic
Universities and colleges--Graduate work
Subject (authority = local)
Topic
General public
Subject (authority = LCSH)
Topic
Biochemistry
Subject (authority = LCSH)
Topic
Interdisciplinary approach in education
Subject (authority = local)
Topic
Multidisciplinary studies
Subject (authority = LCSH)
Topic
Web-based instruction
Subject (authority = LCSH)
Topic
Nucleic acids
Subject (authority = LCSH)
Topic
DNA
Subject (authority = LCSH)
Topic
RNA
Subject (authority = LCSH)
Topic
Proteins
Subject (authority = LCSH)
Topic
Peptides
Subject (authority = LCSH)
Topic
X-ray crystallography
Extension
DescriptiveEvent
Type
Citation
DateTime (encoding = w3cdtf)
2016
AssociatedObject
Name
Journal of Chemical Education
Type
Journal
Relationship
Has part
Reference (type = url)
http://dx.doi.org/10.1021/acs.jchemed.5b00404
Identifier (type = volume and issue)
93(3)
Detail
569-575
Extension
DescriptiveEvent
Type
Grant award
AssociatedEntity
Role
Funder
Name
National Science Foundation
AssociatedEntity
Role
Originator
Name
Stephen K. Burley
AssociatedObject
Type
Grant number
Name
DBI-1338415
Note (type = version identification)
This document is the Accepted Manuscript version of a Published Work that appeared in final form in Journal of Chemical Education, copyright © American Chemical Society after peer review and technical editing by the publisher. To access the final edited and published work see https://dx.doi.org/10.1021/acs.jchemed.5b00404
Note (type = peerReview)
Peer reviewed
RelatedItem (type = host)
TitleInfo
Title
Zardecki, Christine
Identifier (type = local)
rucore30189100001
RelatedItem (type = host)
TitleInfo
Title
Dutta, Shuchismita
Identifier (type = local)
rucore30193300001
RelatedItem (type = host)
TitleInfo
Title
Voigt, Maria
Identifier (type = local)
rucore30193400001
RelatedItem (type = host)
TitleInfo
Title
Burley, Stephen K.
Identifier (type = local)
rucore30193500001
Location
PhysicalLocation (authority = marcorg); (displayLabel = Rutgers, The State University of New Jersey)
NjNbRU
Identifier (type = doi)
doi:10.7282/T3J1055Q
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Rights

RightsDeclaration (AUTHORITY = FS); (ID = rulibRdec0004); (TYPE = [FS] statement #1)
Copyright for scholarly resources published in RUcore is retained by the copyright holder. By virtue of its appearance in this open access medium, you are free to use this resource, with proper attribution, in educational and other non-commercial settings. Other uses, such as reproduction or republication, may require the permission of the copyright holder.
Copyright
Status
Copyright protected
Availability
Status
Open
Reason
Permission or license
RightsEvent
Type
Permission or license
AssociatedObject
Type
License
Name
Multiple author license v. 1
Detail
I hereby grant to Rutgers, The State University of New Jersey (Rutgers) the non-exclusive right to retain, reproduce, and distribute the deposited work (Work) in whole or in part, in and from its electronic format, without fee. This agreement does not represent a transfer of copyright to Rutgers. Rutgers may make and keep more than one copy of the Work for purposes of security, backup, preservation, and access and may migrate the Work to any medium or format for the purpose of preservation and access in the future. Rutgers will not make any alteration, other than as allowed by this agreement, to the Work. I represent and warrant to Rutgers that the Work is my original work. I also represent that the Work does not, to the best of my knowledge, infringe or violate any rights of others. I further represent and warrant that I have obtained all necessary rights to permit Rutgers to reproduce and distribute the Work and that any third-party owned content is clearly identified and acknowledged within the Work. By granting this license, I acknowledge that I have read and agreed to the terms of this agreement and all related RUcore and Rutgers policies.
RightsEvent
Type
Publication notice
Detail
This document is the Accepted Manuscript version of a Published Work that appeared in final form in Journal of Chemical Education, copyright © American Chemical Society after peer review and technical editing by the publisher. To access the final edited and published work see https://dx.doi.org/10.1021/acs.jchemed.5b00404
RightsEvent
Type
Embargo
DateTime (encoding = w3cdtf); (point = start)
2016-01-08
DateTime (encoding = w3cdtf); (point = end)
2017-03-31
Detail
Access to this PDF has been restricted at the publisher's request. The publisher, ACS Publications, requires a 12 month embargo from the date the article was published. The article in this repository will be publicly available after March 31, 2017.
RightsEvent
Type
Permission research
AssociatedEntity
Role
Librarian
Name
Rhonda Marker
Detail
Cf. <http://pubs.acs.org/page/copyright/journals/faqs.html>. "You may deposit a digital file of the Submitted version of your ACS papers publicly in repositories as long as it is for non-commercial purposes, does not violate the ACS Ethical Guidelines, and you have confirmation from the appropriate ACS journal editor that the posting does not conflict with their prior publication policies. This last step is especially important to avoid any misunderstandings that would jeopardize the publication of your work in an ACS journal. Only limited text, graphical material, and data may be posted without this step. . . . If the Submitted version is subsequently published by ACS, the posting should be amended to include the ACS Articles on Request link to the Published version and the following notice:
This document is the unedited author's version of a Submitted Work that was subsequently accepted for publication in [JournalTitle], copyright © American Chemical Society after peer review. To access the final edited and published work, see [insert ACS Articles on Request author-directed link]. If the posting of the accepted version of your manuscript is mandated by your funding agency or primary employer, you may post a digital file of the Accepted version, subject to certain conditions (see the Journal Publishing Agreement User Guide [PDF])."
RightsHolder (type = corporate)
Name
The American Chemical Society and Division of Chemical Education, Inc.
Role
Copyright holder
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Technical

RULTechMD (ID = TECHNICAL1)
ContentModel
Document
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