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S-nitrosylation in brain of mice exposed to low or high doses of gamma rays

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TitleInfo
Title
S-nitrosylation in brain of mice exposed to low or high doses of gamma rays
SubTitle
a bioinformatic investigation of the modulated pathways
Name (type = personal)
NamePart (type = family)
Nicolas
NamePart (type = given)
Fadia
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Fadia Nicolas
Role
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author
Name (type = personal)
NamePart (type = family)
Mahon
NamePart (type = given)
Gwendolyn M
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Gwendolyn M Mahon
Affiliation
Advisory Committee
Role
RoleTerm (authority = RULIB)
chair
Name (type = corporate)
NamePart
Rutgers University
Role
RoleTerm (authority = RULIB)
degree grantor
Name (type = corporate)
NamePart
School of Health Professions
Role
RoleTerm (authority = RULIB)
school
TypeOfResource
Text
Genre (authority = marcgt)
theses
OriginInfo
DateCreated (qualifier = exact)
2018
DateOther (qualifier = exact); (type = degree)
2018-05
CopyrightDate (encoding = w3cdtf); (qualifier = exact)
2018
Place
PlaceTerm (type = code)
xx
Language
LanguageTerm (authority = ISO639-2b); (type = code)
eng
Abstract (type = abstract)
Extensive experimental studies and several human epidemiological surveys have revealed that exposure to high doses of ionizing radiation (>100 mSv) causes significant adverse health outcomes. The mechanisms underlying these effects have been well characterized. In contrast, the biological effects and health risks of exposure to low doses of radiation (<100 mSv) continue to be unclear and are a current subject of conflicting considerations. Due to insufficient statistical power in the limited number of available epidemiological studies evaluating health risks of human exposures to effective doses less than 100 mSv, mechanistic studies in cultured cells and animal models have been considered to be vital for understanding biological effects, and reducing the uncertainty in predicting health risks. This project builds on the body of studies characterizing the biochemical and biological effects of low dose ionizing radiation, but the emphasis is on characterizing post translational modification of proteins, namely S-nitrosylation, an area that is under-studied, even though it could greatly impact radiation sensitivity. Here, changes in S-nitrosylation were studied following in vivo exposure to either a low (0.1 Gy) or high doses (4 Gy) of 137Cs g rays, which mimics doses received in diagnostic and therapeutic radiation, respectively. The goal was to investigate whether similar or distinct S-nitrosylation events are induced in brain tissue following low and high dose g ray irradiation to test the following hypothesis: “Depending on radiation dose, S-nitrosylation triggers groups of proteins into participating in specific pathways that are protective (e.g. DNA repair, antioxidation reactions) or detrimental (loss of healthy cells, oxidative stress)”. Young adult C57BL/6J male mice were exposed to either 0, 0.1 or 4 Gy of Cesium- 137 g rays delivered uniformly to the whole body. Thirteen days after irradiation, the animals were euthanized, and the brains were harvested. The proteins were immediately extracted and processed for mass spectrometry analyses of global changes in Snitrosylation. Using Bioinformatic tools, the mass spectrometry results were analyzed by the R/Bioconductor statistical package. Several clustering approaches were used in order to create groups of proteins showing similar levels of S-nitrosylation for dose independent responses to radiation exposure, and dissimilar levels of S-nitrosylation for dose dependent responses. Clustering methods used a range of methods from purely mathematical to more intuitive manual approaches with somewhat arbitrary cutoff to analyze the proteomic data from irradiated and control samples. Additional clustering techniques like k-means and hierarchical clustering with several different numbers of clusters were applied to eliminate the cutoff bias. In addition, Ingenuity Pathway Analysis (IPA) software package was used to elucidate biological significance of the different groups of proteins. Depending on the clustering approaches used, several significant pathways were identified. For example, relative to control, the neuronal nitric oxide synthase (nNOS) pathway showed inactivation under low dose irradiation and activation under high dose irradiation. This pathway is under control of the N-methyl-D-aspartate receptor (NMDAR) activity, which becomes hyper-activated under high dose irradiation resulting in neurotoxicity. In conclusion, our results suggest that mouse exposure to low doses of Cesium-137 g rays may result in modulation of signaling pathways that promote protective effects through S-nitrosylation of certain key proteins and de-S-nitrosylation of others. This is an area that needs further investigation to elucidate the exact mechanism by which Snitrosylation occurs, and to confirm the role of the modulated pathways suggested by IPA in regulating cellular/tissue responses that impact sensitivity to radiation.
Subject (authority = RUETD)
Topic
Biomedical Informatics
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Title
Rutgers University Electronic Theses and Dissertations
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ETD
Identifier
ETD_8914
PhysicalDescription
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electronic resource
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application/pdf
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text/xml
Note
Supplementary File: S Nitrosylation Supp file
Extent
1 online resource (xvii, 169 p. : ill.)
Note (type = degree)
Ph.D.
Note (type = bibliography)
Includes bibliographical references
Subject (authority = ETD-LCSH)
Topic
Radiation
Note (type = statement of responsibility)
by Fadia Nicolas
RelatedItem (type = host)
TitleInfo
Title
School of Health Professions ETD Collection
Identifier (type = local)
rucore10007400001
Location
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NjNbRU
Identifier (type = doi)
doi:10.7282/T3Q52SZ5
Genre (authority = ExL-Esploro)
ETD doctoral
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Rights

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The author owns the copyright to this work.
RightsHolder (type = personal)
Name
FamilyName
Nicolas
GivenName
Fadia
Role
Copyright Holder
RightsEvent
Type
Permission or license
DateTime (encoding = w3cdtf); (qualifier = exact); (point = start)
2018-04-18 10:50:21
AssociatedEntity
Name
Fadia Nicolas
Role
Copyright holder
Affiliation
Rutgers University. School of Health Professions
AssociatedObject
Type
License
Name
Author Agreement License
Detail
I hereby grant to the Rutgers University Libraries and to my school the non-exclusive right to archive, reproduce and distribute my thesis or dissertation, in whole or in part, and/or my abstract, in whole or in part, in and from an electronic format, subject to the release date subsequently stipulated in this submittal form and approved by my school. I represent and stipulate that the thesis or dissertation and its abstract are my original work, that they do not infringe or violate any rights of others, and that I make these grants as the sole owner of the rights to my thesis or dissertation and its abstract. I represent that I have obtained written permissions, when necessary, from the owner(s) of each third party copyrighted matter to be included in my thesis or dissertation and will supply copies of such upon request by my school. I acknowledge that RU ETD and my school will not distribute my thesis or dissertation or its abstract if, in their reasonable judgment, they believe all such rights have not been secured. I acknowledge that I retain ownership rights to the copyright of my work. I also retain the right to use all or part of this thesis or dissertation in future works, such as articles or books.
RightsEvent
DateTime (encoding = w3cdtf); (qualifier = exact); (point = start)
2018-05-31
DateTime (encoding = w3cdtf); (qualifier = exact); (point = end)
2020-05-30
Type
Embargo
Detail
Access to this PDF has been restricted at the author's request. It will be publicly available after May 30th, 2020.
Copyright
Status
Copyright protected
Availability
Status
Open
Reason
Permission or license
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